PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK40094.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family Trihelix
Protein Properties Length: 113aa    MW: 12688 Da    PI: 4.5175
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK40094.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix415.1e-134289147
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfersp 47
                rW++ e+laL+++r+em++++r++ lk+plWee++++  +++ +e++ 
  KFK40094.1 42 RWPRPETLALLRIRSEMDKAFRDSTLKAPLWEEIARRSsSRKEIEKEE 89
                8**********************************9986334444443 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.6E-741105No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
MSVNSSGPLD SSGGVIGSSD EEEKDMKMEE TGDRGGGGGG NRWPRPETLA LLRIRSEMDK  60
AFRDSTLKAP LWEEIARRSS SRKEIEKEEK ELERIVYEVD KRVNGEAREE TTE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006300884.11e-24hypothetical protein CARUB_v10019974mg, partial
RefseqXP_010533325.18e-25PREDICTED: trihelix transcription factor GT-2-like, partial
SwissprotQ391173e-24TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A087HD924e-74A0A087HD92_ARAAL; Uncharacterized protein
STRINGAT1G76890.27e-22(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2914122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-17Trihelix family protein